Skills Data Science Auditing Figures and Tables for JAMA

Auditing Figures and Tables for JAMA

v20260724
jama-figures-tables
A comprehensive guide and checklist for ensuring that figures and tables in medical manuscripts comply with the rigorous reporting standards of JAMA. It covers mandatory elements such as CONSORT flow diagrams, reporting effect sizes with 95% CIs, structuring baseline characteristics, and avoiding statistical misrepresentation (e.g., using p-values instead of CIs).
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Overview

Figures & Tables (jama-figures-tables)

When to trigger

  • The RCT/review lacks its required flow diagram
  • Tables are cluttered, over-numerous, or exceed the journal's exhibit allowance
  • The baseline-characteristics table is missing or misused
  • A figure shows p-values but not effect sizes / confidence intervals

The exhibits a JAMA paper usually needs

Exhibit Purpose
Flow diagram (CONSORT/PRISMA/STARD) Participant or study-selection accounting
Table 1 — baseline characteristics Describe groups; show comparability (not significance)
Main-outcome table Primary/secondary effects with 95% CIs
Forest plot (meta-analysis / subgroups) Effect sizes + CIs across studies/subgroups
Kaplan-Meier / time-to-event figure Survival or event curves with numbers at risk

Keep the count within JAMA's current figure/table limit — verify the exact number on the Instructions for Authors page rather than assuming.

Conventions JAMA expects

  • Flow diagram is mandatory for RCTs (CONSORT) and systematic reviews (PRISMA). Account for every participant/record: screened, excluded (with reasons), enrolled, analyzed.
  • Table 1 shows comparability, not p-values. For RCTs, comparing baseline groups with significance tests is discouraged; report characteristics and let randomization speak.
  • Every estimate carries its 95% CI in figures and tables, not bare p-values.
  • Self-contained exhibits. Each table/figure stands alone: full title, defined abbreviations in the footnote, units, denominators (n/N), and the analysis population.
  • Kaplan-Meier curves include numbers at risk beneath the time axis.
  • Forest plots order studies sensibly, show weights and the pooled estimate with its CI, and report heterogeneity.
  • No chartjunk. Avoid 3-D bars, truncated axes that exaggerate effects, and dual axes that mislead.
  • Color and accessibility. Use colorblind-safe palettes; ensure the figure reads in grayscale.

Checklist

  • Required flow diagram present and reconciles all participants/records
  • Table 1 reports characteristics without inappropriate significance testing (RCT)
  • Every effect estimate shows its 95% CI
  • Each exhibit is self-contained (title, footnotes, abbreviations, units, n/N)
  • KM curves show numbers at risk; forest plots show weights + pooled CI + heterogeneity
  • Total figures + tables within the journal's limit (verify current number)
  • Axes honest (no truncation that exaggerates); palette colorblind-safe
  • No duplication of the same data across a table and a figure

Anti-patterns

  • Submitting an RCT or review with no flow diagram
  • P-value-laden Table 1 implying randomization "failed"
  • Bars or curves with no confidence intervals
  • Truncated y-axis that visually inflates a small effect
  • KM plot without numbers at risk
  • The same numbers shown in both a table and a figure
  • Abbreviations undefined in the footnote

Worked example: auditing the main exhibits (illustrative)

Vignette (illustrative): a multicenter randomized clinical trial, N = 2,200 adults, time-to-event primary outcome. For the Journal of the American Medical Association, the exhibit set is a CONSORT flow diagram reconciling all 2,200 participants (screened, randomized, analyzed, lost), a Table 1 of baseline characteristics shown without between-group significance tests, a main-outcome table giving the hazard ratio with its 95% CI plus the absolute risk difference, and a Kaplan-Meier figure with numbers at risk beneath the time axis. A bar chart of the primary outcome with no confidence interval, or a truncated y-axis that visually inflates a small effect, is the kind of exhibit a JAMA reviewer sends back.

Reviewer pushback and the JAMA fix

  • "RCT submitted with no flow diagram." Fix: add the CONSORT diagram and reconcile every participant with reasons for exclusion.
  • "Table 1 reports p-values (RCT)." Fix: drop the significance tests; show characteristics and let randomization speak.
  • "Figure shows p-values, not effect sizes." Fix: display the estimate with its 95% CI on every exhibit.

Calibration anchors (hedge where uncertain): the mandatory flow diagram, p-value-free Table 1 for RCTs, estimate-plus-CI on every exhibit, and numbers-at-risk on KM curves are durable; the exact figure/table allowance is volatile — confirm against current author guidelines.

Exhibit pass for JAMA

Run this as a concrete capability pass. First lock the clinical question, patient population, estimand or endpoint, safety/ethics issue, and reporting checklist; then test whether the manuscript addresses clinical reviewers who ask whether the evidence changes patient care, policy, or medical decision-making while satisfying reporting standards.

  • Primary move: For every figure or table, state the patient/study object, denominator, uncertainty display, and the clinical claim it supports.
  • Decision ledger: return claim / evidence / blocker / next edit rows so the next pass can patch the manuscript directly.
  • Sibling comparison: compare against NEJM for field-changing clinical medicine, Lancet for global-health breadth, specialty journals for narrower clinical domains; if the neighboring outlet has the stronger audience claim, recommend re-routing before polishing.
  • Verification floor: before submission-ready advice, re-open resources/official-source-map.md for volatile rules and name the one unresolved fact that could change the recommendation.

Output format

【Flow diagram】present + reconciles / missing
【Table 1 appropriate】yes / no
【All estimates show 95% CI】yes / no
【Exhibit count vs limit】X (limit per author instructions)
【Self-contained exhibits】yes / fixes: ...
【Issues to fix】...
【Next skill】jama-structured-abstract
Info
Category Data Science
Name jama-figures-tables
Version v20260724
Size 6.27KB
Updated At 2026-07-28
Language