Skill UI

Diffusion-based deep learning tool for predicting 3D binding poses of small-molecule ligands to protein targets from PDB files or sequences plus SMILES/SDF/MOL2. Supports single docking, batch virtual screening, and confidence-score analysis; not for binding affinity prediction.

Run open-source molecular design and structural biology tools on Tamarind Bio's managed cloud GPUs via REST API or MCP. Covers AlphaFold/Boltz/Chai structure prediction, RFdiffusion and ProteinMPNN design, antibody and nanobody engineering, DiffDock docking, binding affinity, MSA generation, and molecular dynamics — no local GPU setup needed.