Skill UI

scvi-tools is a comprehensive Python framework for probabilistic deep generative models in single-cell genomics. Built on PyTorch and PyTorch Lightning, it enables batch correction, transfer learning, differential expression analysis with uncertainty, and multi-modal data integration. Best for advanced modeling of single-cell RNA-seq, ATAC-seq, CITE-seq, spatial transcriptomics, and specialized modalities like methylation and cytometry.

This skill provides real-time monocular depth estimation using advanced models like Depth Anything v2. It transforms live camera feeds by generating colorized depth maps, enabling depth overlays and detailed scene understanding. Crucially, it supports a 'privacy mode' that anonymizes visual identities by using depth-only transformation, preserving only the spatial layout and movement patterns for secure monitoring purposes. Optimized for both CoreML on macOS and PyTorch on other platforms.

DeepSpot-M is a multimodal foundation model that generates virtual spatial transcriptomics from H&E histology images. It maps 224x224 tiles to spatial gene expression using deep learning, supporting over 19k protein-coding genes. Ideal for research in pathology and cancer genomics, requiring gated model access and Python environment.