nextflow
K-Dense-AI/scientific-agent-skills
Nextflow is a powerful workflow language and runtime for building reproducible, portable, and scalable data pipelines. It is dominant in bioinformatics, enabling complex dataflow programming and managing workflows across diverse environments, including local machines, HPC clusters (SLURM), and cloud platforms (AWS, Azure). This skill covers the full lifecycle: running established pipelines (like nf-core), developing custom modular workflows, configuring containerization, and ensuring computational reproducibility.
