Skill UI

Surfaces Monte Carlo data observability insights—health, lineage, alerts, and monitors-as-code—before developers edit dbt models or SQL pipelines, ensuring risk-aware code changes.

This skill automatically generates an interactive SQL Notebook designed to validate changes in dbt models or snapshots. It processes changes identified from a GitHub PR or local repository, generating comparison queries that compare 'before' (production) and 'after' (development) data states. It is essential for embedding data observability and quality checks into CI/CD pipelines.

A comprehensive expert prompt for evaluating Power BI data models. It guides the assessment of model architecture (Star Schema, relationships), storage optimization (Import, DirectQuery, Dual), data quality, performance scalability, and governance best practices. Use this when reviewing an existing BI model to ensure it is robust, maintainable, and highly performant.

Provides programmatic access to massive, versioned public single-cell and spatial transcriptomics datasets from CZ CELLxGENE. This skill allows users to efficiently query specific subsets of cell metadata, gene expression matrices, embeddings, and summary statistics across various organisms, tissues, and diseases. It is ideal for large-scale, memory-efficient biological research and model training without full dataset downloads.

Geniml is a comprehensive Python package designed for applying machine learning models to genomic interval data, typically stored in BED files. It provides several unsupervised methods—including Region2Vec and BEDspace—to learn robust embeddings of genomic regions, single cells (scATAC-seq), and associated metadata. Use cases include dimensionality reduction, structural variation analysis, cell-type annotation, and cross-modal querying in genomics research.

This skill proactively detects and reports comprehensive system resources, including CPU cores, GPU types (NVIDIA, AMD, Apple Silicon), available memory, and disk space. It generates a detailed JSON report with strategic, context-aware recommendations for optimizing scientific computing workflows, such as recommending parallel processing libraries (Dask, joblib), out-of-core methods (Zarr), or appropriate GPU acceleration backends (Metal, ROCm). Use this before any large-scale data analysis, model training, or computationally intensive simulation to make informed architectural decisions.

Gtars is a high-performance toolkit written in Rust with Python bindings, designed for comprehensive analysis of genomic interval data. It provides specialized modules for overlap detection, generating coverage tracks (WIG/BigWig), tokenization for Machine Learning models, and detailed fragment analysis in single-cell genomics. Use it for robust bioinformatics pipelines and computational genomics research.

Histolab is a specialized Python library for digital pathology research, enabling robust processing of Whole Slide Images (WSI). It automates complex workflows including tissue detection, sophisticated segmentation, and flexible tile extraction from various formats (SVS, TIFF). This tool is crucial for preparing structured, high-quality datasets required for deep learning models and advanced computational pathology analysis.

Hypogenic is an advanced framework that uses Large Language Models (LLMs) to systematically generate and test hypotheses on complex tabular datasets. It supports three powerful modes: data-driven generation (HypoGeniC), literature-grounded refinement (HypoRefine), and combined union methods. This tool is essential for accelerating scientific discovery in fields such as predictive modeling, content analysis, and deception detection by combining empirical data insights with theoretical knowledge.

LaminDB is an open-source, lineage-native lakehouse specifically designed for complex biological datasets and models. It provides unified capabilities for querying, tracking data lineage, validating schemas, and ensuring FAIR compliance across diverse data types (e.g., AnnData, Parquet, Zarr). Use this skill when managing multi-modal genomic data, tracking computational workflows (like Nextflow/Snakemake), or building robust, reproducible data infrastructure in bioinformatics.

This advanced skill generates comprehensive, professional-grade market research reports (50+ pages) modeled after top consulting firm deliverables (McKinsey, BCG). It supports deep data analysis using research-lookup, multi-framework strategic assessment (PESTLE, SWOT, Porter's Five Forces), and extensive visual generation using scientific schematics and image generation tools. The output is in professional LaTeX format, compiled to PDF, suitable for strategic planning, investment decisions, and thought leadership.

MarkItDown is a powerful tool designed to convert a wide array of file types—including PDF, DOCX, images, audio, and structured data (JSON/XML)—into clean, token-efficient Markdown format. It supports advanced features like OCR for scanned documents, transcription for audio, and AI-enhanced descriptions, making diverse content readily consumable and structured for modern Language Models and AI pipelines.