Skill UI

A comprehensive Python wrapper for OpenMS, designed for sophisticated computational mass spectrometry workflows. It supports end-to-end analysis in proteomics and metabolomics, enabling feature detection, peptide/protein identification, quantitative analysis (label-free/isobaric), and adduct/accurate mass annotation. Ideal for researchers processing complex LC-MS/MS raw data and running high-level pipelines.

PyTDC (Therapeutics Data Commons) is an open-science platform providing comprehensive, AI-ready datasets and benchmarks for the entire drug discovery and development pipeline. It supports single-instance prediction (e.g., ADME, toxicity), multi-instance prediction (DTI, DDI, PPI), and novel molecule generation (MolGen). Use this skill for benchmarking machine learning models and predicting complex biomedical properties.

A comprehensive, scalable Python toolkit designed for end-to-end single-cell RNA-seq data analysis. It supports crucial steps including quality control (QC), normalization, dimensionality reduction (PCA, UMAP, t-SNE), cell clustering, and differential gene expression analysis. The skill provides ready-to-run scripts for analyzing various formats (e.g., .h5ad, 10X, R-native) and generating publication-quality visualizations and cell type annotations.

A comprehensive resource detailing the use of scikit-learn, the industry-standard Python library for classical machine learning. Use this skill for the entire ML lifecycle, including supervised tasks (classification, regression), unsupervised tasks (clustering, dimensionality reduction), data preprocessing, model evaluation, and building production-ready pipelines.

Zarr is a robust Python library designed for storing massive N-dimensional arrays. It supports efficient chunking, compression, and parallel I/O, making it ideal for large-scale scientific computing pipelines. Seamlessly integrates with NumPy, Dask, and Xarray, and supports cloud storage backends like S3 and GCS via fsspec, ensuring high performance in cloud-native environments.

A comprehensive tool for managing annotation datasets, supporting full CRUD operations, label management, and advanced export functionality. It specifically handles COCO format export and facilitates uploading datasets to platforms like Kaggle, streamlining the data pipeline for AI model development.

Provides comprehensive programmatic control over Apify's core data infrastructure, including Datasets, Key-Value Stores, and Request Queues. This skill allows users to perform CRUD operations on various storage types, manage data persistence, and orchestrate complex, multi-stage data pipelines (e.g., scrape -> transform -> export). Ideal for building robust, end-to-end web scraping and data processing automation workflows.

A comprehensive workflow designed to build deep revenue analytics dashboards using exported Clari data. It calculates key metrics such as forecast accuracy, pipeline coverage ratios, and tracks representative performance changes. Ideal for financial analysts and sales managers needing to assess revenue health and forecast reliability.

This skill provides a robust solution for monitoring critical forecast changes within Clari. Since Clari lacks native real-time webhooks for all data, this system implements change detection by polling periodic data exports and comparing current snapshots against historical records. It calculates the percentage change and can trigger immediate alerts via platforms like Slack, ensuring users are always aware of significant shifts in revenue forecasts or sales pipelines.

A comprehensive guide and implementation template for building robust data ingestion pipelines into ClickHouse. Supports multiple sources including HTTP webhooks (with batching), Kafka streams, S3, and direct SQL inserts. Demonstrates best practices for data handling, such as deduplication using ReplacingMergeTree and monitoring query logs, ensuring reliable, scalable data analytics.

This skill provides the core mechanism for integrating Hex into external data pipelines. It enables triggering, monitoring, and managing Hex projects (e.g., via Airflow or Dagster) programmatically. Users can implement parameterized runs, execute multi-step ETL workflows sequentially, and handle status polling and error management, making it ideal for production data orchestration.

This guide provides comprehensive steps for setting up and authenticating the official ClickHouse client for both Node.js and Python. It covers connecting to ClickHouse Cloud or a self-hosted instance, managing environment variables, and verifying the connection using sample code snippets. Ideal for new ClickHouse projects or integrating data analytics pipelines into existing applications.