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This skill provides comprehensive guidance and established patterns for conducting rigorous scientific research and complex data analysis. It helps users structure their thinking process, ensuring a systematic and methodical approach to scholarly inquiry. Ideal for academic projects, literature reviews, and complex data interpretation.

This skill provides a comprehensive guide and implementation for deploying a production-ready, containerized integration service using Docker. It connects to the Juicebox API to manage datasets, execute advanced AI-powered analyses, and retrieve structured business insights. The service includes health check mechanisms and supports zero-downtime rolling updates, ensuring reliable real-time data processing and analysis.

This skill builds and executes automated pipelines to clean, validate, and transform data for machine learning, covering ETL workflows, error handling, and quality reporting so Claude can deliver analysis-ready datasets.

Automates clustering workflows on supplied datasets with K-means, DBSCAN, or hierarchical algorithms, handling preprocessing, validation, metrics, and visualizations to expose groupings and anomalies.

Connect to NCBI's GEO repository, search series/samples/platforms via Entrez queries, fetch profiles, and download raw/processed matrices using GEOparse for transcriptomics and expression analysis workflows.

High-performance Rust toolkit with Python bindings for genomic interval analysis, covering overlap detection, coverage track generation, ML tokenization, reference sequence handling, fragment processing, and scoring workflows for sequencing datasets.

Histolab streamlines whole-slide microscopy by automating tissue detection, tile extraction, and stain normalization for H&E scans, making it ideal for lightweight dataset prep and quick tile-based analysis.

NeuroKit2 is a Python biosignal processing toolkit for ECG, EEG, EDA, RSP, EMG, and EOG data that automates cleaning, feature extraction, and HRV/complexity analysis for psychophysiology, clinical, and HCI studies.

End-to-end Neuropixels recording analysis covering SpikeGLX/OpenEphys/NWB loading, preprocessing, motion correction, Kilosort4 sorting, quality metrics, Allen/IBL curation, and AI-assisted visualization for extracellular electrophysiology.

Perform comprehensive digital forensic analysis on raw (dd), E01, or AFF disk images using industry-standard tools like Autopsy and The Sleuth Kit. This process allows investigators to recover deleted files, examine file system metadata, search for specific keywords, and build detailed investigation timelines. It is essential for generating structured reports from digital evidence in legal and cybersecurity investigations.

This guide details how to write advanced correlation searches using Splunk's Search Processing Language (SPL). It covers techniques like threshold-based detection, sequence analysis, and anomaly detection to identify sophisticated security threats (e.g., brute force, data exfiltration, lateral movement) in a Security Operations Center (SOC) environment. Mastery of SPL is essential for closing SIEM detection gaps and ensuring compliance.

A comprehensive guide and workflow for recovering deleted files (documents, images, videos, etc.) from damaged storage media, forensic disk images, or corrupted file systems. It utilizes PhotoRec's file signature-based carving engine, allowing data recovery regardless of file system damage. The process includes advanced steps for file validation, hashing, and organizing evidence for forensic analysis.