Skill UI

Access NCBI Gene data via E-utilities or Datasets API to look up genes by symbol or ID, retrieve RefSeqs, GO terms, chromosomal locations, phenotypes, and run batch workflows for annotation pipelines.

Direct REST/API access to PubMed for constructing complex Boolean or MeSH queries, filtering by publication attributes, and automating literature retrieval or citation management via NCBI’s E-utilities.

SciPy provides open-source algorithms and utilities for scientific computing, including integration, optimization, statistics, and signal processing, enabling researchers and engineers to build reliable numerical applications.

Provides REST API access to PubMed for building advanced Boolean/MeSH queries, filtering by publication details, and programmatically fetching citations through E-utilities, making it ideal for systematic reviews and automated literature workflows.

This guide provides a comprehensive workflow for searching and retrieving biomedical literature from PubMed and NCBI. It covers advanced query construction using MeSH terms and specific field tags, advanced filtering (date, publication type), and a repeatable programmatic workflow using NCBI E-utilities (esearch, efetch). Essential for researchers conducting systematic reviews and literature monitoring.