Skill UI

Access NCBI Gene data via E-utilities or Datasets API to look up genes by symbol or ID, retrieve RefSeqs, GO terms, chromosomal locations, phenotypes, and run batch workflows for annotation pipelines.

Direct REST/API access to PubMed for constructing complex Boolean or MeSH queries, filtering by publication attributes, and automating literature retrieval or citation management via NCBI’s E-utilities.

SciPy provides open-source algorithms and utilities for scientific computing, including integration, optimization, statistics, and signal processing, enabling researchers and engineers to build reliable numerical applications.

This suite provides comprehensive utilities for digital forensic investigations, allowing users to analyze critical Windows artifacts. Tools like KAPE, MFTECmd, PECmd, and RECmd parse registry hives, $MFT records, prefetch files, and event logs. It is essential for building a robust timeline of program execution, file access patterns, and system persistence during DFIR incident response.

Provides REST API access to PubMed for building advanced Boolean/MeSH queries, filtering by publication details, and programmatically fetching citations through E-utilities, making it ideal for systematic reviews and automated literature workflows.

This guide provides a comprehensive workflow for searching and retrieving biomedical literature from PubMed and NCBI. It covers advanced query construction using MeSH terms and specific field tags, advanced filtering (date, publication type), and a repeatable programmatic workflow using NCBI E-utilities (esearch, efetch). Essential for researchers conducting systematic reviews and literature monitoring.

This guide provides a comprehensive workflow for searching and retrieving biomedical literature from PubMed and NCBI. It covers advanced query construction using MeSH terms and specific field tags, advanced filtering (date, publication type), and a repeatable programmatic workflow using NCBI E-utilities (esearch, efetch). Essential for researchers conducting systematic reviews and literature monitoring.

This skill programmatically searches and fetches biomedical literature from PubMed and PMC using NCBI E-utilities (ESearch, EFetch, ESummary). It allows users to gather large corpora of abstracts, full texts, and metadata related to specific conditions, drugs, or genes. Ideal for building evidence bases, performing biomedical Named Entity Recognition (NER), or summarizing scientific findings.