Skill UI

PufferLib is a high-performance library designed for advanced reinforcement learning simulations and training. It excels in parallel environment simulation, offering optimized vectorization and native support for multi-agent systems. Utilizing algorithms like PuffeRL (optimized PPO+LSTM), it achieves millions of steps per second, significantly accelerating research and deployment across single-agent and multi-agent environments.

PyDESeq2 brings the DESeq2 differential expression workflow to Python, letting users load bulk RNA-seq counts, specify design formulas, fit DESeq2 models, run Wald tests with FDR correction, optionally apply apeGLM shrinkage, and export gene-level statistics within pandas/AnnData pipelines.

Pydicom is a Python toolkit for reading, writing, and manipulating DICOM medical imaging files, helping teams extract pixel data, manage metadata, anonymize records, convert to standard formats, and integrate with PACS workflows in healthcare research and radiology applications.

PyHealth delivers a full-stack Python toolkit for building, evaluating, and deploying clinical machine learning models, covering EHR datasets, medical coding systems, physiological signals, and healthcare-tailored architectures such as RETAIN, SafeDrug, and Transformer-based pipelines.

RDKit delivers a Python-based cheminformatics toolkit for parsing SMILES/SDF, computing descriptors, generating 2D/3D coordinates, fingerprinting, searching substructures, managing reactions, and visualizing molecules, ideal for drug discovery and computational chemistry workflows.

Real-time research lookup that auto-selects between Parallel Chat API and Perplexity sonar-pro-search to gather papers, facts, market data, and cited findings.

Transforms data into publication-ready figures with multi-panel layouts, precise annotations, colorblind-friendly palettes, and journal formatting using matplotlib, seaborn, and plotly plus export helpers for PDF/EPS/TIFF.

scikit-bio provides a Python-native biological data toolkit for reading/writing FASTA/Newick files, manipulating sequences, building alignments and phylogenies, and calculating diversity metrics for microbiome and ecology workflows.

A comprehensive guide for systematic statistical analysis, designed for academic research. This skill assists in selecting the correct hypothesis tests (t-test, ANOVA, regression, chi-square), checking assumptions (normality, homogeneity), performing advanced analyses (Bayesian methods, power analysis), calculating effect sizes, and generating full APA-formatted reports for publication.

Reference for building Graph Neural Networks with PyTorch Geometric, covering data objects, datasets, transforms, convolution layers, lazy initialization, and heterogeneous support so you can quickly tackle node, link, and graph tasks.

A comprehensive skill for leveraging massive pre-trained transformer models across diverse AI domains, including Natural Language Processing (NLP), Computer Vision (CV), and Audio. Use this skill for advanced tasks such as text generation, classification, question answering, summarization, object detection, and model fine-tuning on proprietary datasets. It provides streamlined pipelines and granular control for deployment.

Generates concise 3-4 page LaTeX/PDF treatment plans across medical specialties, embedding SMART goals, evidence-based interventions, HIPAA-compliant formatting, and mandated AI-generated schematics for quick clinical actionability.