Skill UI

Provides a detailed, multi-platform workflow to monitor long-running computational experiments. It checks the status of jobs across various environments (SSH, vast.ai, Modal), collects screen logs, fetches structured JSON results, and pulls detailed training metrics (loss curves, accuracy) from Weights & Biases (W&B). Essential for MLOps and automated result review.

A comprehensive guide for mastering version control using GitHub and Git. It provides two modes: Guided Setup for first-time users, and an adaptive, hands-on curriculum for learning advanced concepts like branching, PR workflows, and CI/CD. The system automatically adjusts language and depth based on the user's skill level, ensuring effective, real-world learning.

A comprehensive tool for generating publication-quality figures essential for Machine Learning and AI academic papers. It supports two distinct workflows: generating complex system architecture and workflow diagrams using AI (Gemini), and creating precise, data-driven visualizations (line charts, heatmaps, etc.) using standard libraries like matplotlib and seaborn. Use it when preparing any figure for a conference submission.

Trackio is an essential library for logging, visualizing, and analyzing machine learning training experiments. It provides multi-interface support: a Python API for real-time metric logging and alert firing during training; a Command Line Interface (CLI) for retrieving historical metrics and alerts; and synchronization capabilities to Hugging Face Spaces for persistent dashboards. This tool is crucial for debugging, diagnosing training issues (like loss spikes), and automating ML workflow iteration.

An advanced technical writer specializing in creating structured, high-quality software documentation. This skill strictly adheres to the Diátaxis Framework, ensuring content is categorized into Tutorials (learning), How-to Guides (problem-solving), Reference (technical details), and Explanations (concept understanding). It follows a rigorous workflow: clarification, structure proposal, and content generation, guaranteeing clarity, accuracy, and user-centricity.

A Socratic mentoring workflow that coaches junior developers and AI newcomers through questions, encouraging reflection, Copilot-assisted loops, and safe learning practices without handing out solutions.

This coach guides users through a progressive mastery of AI, structured across three layers: AI User (prompting), AI-Enhanced Worker (workflow integration), and AI Builder (ML foundations). It uses Socratic questioning, layered scaffolding, and spaced repetition to build genuine, transferable AI literacy, moving beyond simple copy-pasting prompts to deep conceptual understanding of models, transformers, and RAG.

This skill provides programmatic access to the CZ CELLxGENE Census, a comprehensive collection of versioned public single-cell and spatial transcriptomics data. It enables efficient querying of population-scale cell metadata, gene expression slices, and embeddings without downloading entire datasets. Suitable for analyzing human, mouse, and other organism data across tissues and diseases. Integrates with Scanpy, AnnData, and TileDB-SOMA for large-scale analysis and machine learning workflows.

This comprehensive geospatial science skill covers remote sensing, GIS, spatial analysis, and machine learning for Earth observation. It supports satellite imagery processing, vector and raster data operations, spatial statistics, and point cloud processing. Users can utilize cloud-native workflows and 8 programming languages with 500+ code examples. Ideal for terrain analysis, hydrological modeling, and marine spatial analysis tasks.

Build clinical and healthcare deep learning pipelines with PyHealth: load EHR, signal, and imaging datasets, define prediction tasks, instantiate models, train, and evaluate using a modular five-stage workflow.

PyTDC enables discovery of therapeutic machine learning tasks, access to approved datasets, task-aware data splits, evaluation metrics, benchmark groups, and molecular oracle workflows. Designed for biomedical research and drug discovery applications using Python.

PyTorch Lightning is a deep learning framework that organizes PyTorch code to eliminate boilerplate while maintaining flexibility. It automates training workflows, supports multi-GPU/TPU orchestration, and implements best practices for neural network training. Features include LightningModules, Trainers, data pipelines, callbacks, logging (W&B, TensorBoard), and distributed training strategies like DDP and FSDP for scalable training.