Skill UI

A comprehensive guide for authors to determine if their manuscript meets the stringent standards of Science Translational Medicine. This skill assesses the necessary dual mandate: demonstrating both a solid mechanistic insight and a credible, measurable clinical translation arc (drug, device, or biomarker). It covers scope fit, required human evidence standards, necessary preclinical validation, and specific structural requirements for submission.

This guide provides a comprehensive audit checklist for designing and evaluating sensor-based systems (SenSys). It mandates rigorous, real-world measurements across five core axes: energy efficiency, on-device latency distribution, ground truth accuracy, deployment realism, and embedded AI footprint. It ensures that research results are based on measured hardware performance, not simulations or idealized baselines.

This skill automates the creation of comprehensive Model Cards for OpenMed clinical NER or de-identification models. It gathers data from various OpenMed evaluation reports (e.g., `GateReport`, `fairness_report`, `error_report`) to structure critical governance information, including intended use, quantitative performance metrics, subgroup analysis, limitations, and required medical-device disclaimers. It ensures documentation is reproducible and compliant for clinical AI deployment.

A robust, on-device solution for processing large-scale clinical text corpora. Supports batch NER, PII extraction, and de-identification over thousands of notes. Features include sharding, checkpointing, resumable functionality, and streaming results to JSONL, ensuring PHI safety and constant memory usage for massive datasets.

This module provides a lazy adapter registry to seamlessly integrate OpenMed's clinical PII detection with major NLP frameworks like Microsoft Presidio, spaCy, and LangChain. It allows users to use OpenMed for enhanced PII recall, merge spans, or implement on-device PHI redaction guardrails without rewriting entire pipelines.

This skill acts as a comprehensive map for developing clinical and biomedical NLP pipelines using OpenMed. OpenMed is a local-first Python library that performs named-entity recognition (NER), protected health information (PHI) de-identification, and FHIR export, all running fully on-device without cloud calls. Use this guide when starting a new clinical text project, needing to select the appropriate capability (e.g., zero-shot NER, auditing, or FHIR conversion), or requiring an entry point for the core OpenMed features.

This specialized skill is designed for advanced reverse engineering of firmware images in CTF environments. It guides users to map partition tables, trace complex boot chains (bootloader, kernel, init), analyze update packages, and recover embedded secrets or credentials. Use it when understanding the device's core architecture and execution path is necessary to find the decisive artifact.

A powerful, on-device tool for removing, masking, or replacing sensitive Protected Health Information (PHI/PII) from clinical free text. It ensures patient privacy by running fully locally, supporting methods like masking, hashing, and date shifting. Essential for preparing medical records for safe sharing, storage, or analysis, adhering to standards like HIPAA and GDPR.

This skill de-identifies sensitive PII from clinical notes across numerous languages, including Spanish, German, French, and Arabic. It automatically selects language-specific PII models, national ID regex patterns, and generates locale-aware fake surrogates. Designed for global healthcare datasets, it runs entirely on-device, ensuring maximum privacy and linguistic accuracy for diverse international clinical records.

This skill deploys the OpenMed Model Context Protocol (MCP) server, exposing critical clinical NLP tools such as NER, PII extraction, and de-identification. It enables AI coding agents and chat clients to interact with OpenMed's capabilities via simple tool calls, running locally on-device to ensure user data privacy and security. Supports both stdio and Streamable HTTP deployment modes.

This guide outlines the methodology for conducting hardware security research on embedded systems. It covers physical interface analysis (UART, JTAG, SWD), debug pad triage, secure boot evaluation, and offline firmware extraction. It emphasizes systematic, non-destructive testing protocols and responsible handling of physical devices.

This module converts diverse clinical inputs—including scanned images, faxes, CSV/TSV exports, and C-CDA XML—into a normalized, clean text format (`ExtractedDocument`). It supports on-device OCR (Tesseract/PaddleOCR) and structured redaction for tables. It is the crucial first stage for feeding de-identification and Named Entity Recognition (NER) pipelines.