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Knap CLI Markdown Renderer
knap
kepano/obsidian-skills
247
Knap is a command-line tool that renders Markdown templates using structured data like JSON or CSV. It supports variables, filters, and logic to batch-generate notes, format Defuddle output, and validate templates. Ideal for developers automating note creation and content processing workflows.
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NCATS ARAX Knowledge Graph Query
ncats-arax
K-Dense-AI/scientific-agent-skills
250
This skill queries the NCATS Translator ARAX API for biomedical knowledge-graph relationships. It supports one-hop and two-hop lookups with Biolink constraints, entity normalization, and provider federation. Users can inspect provenance and edge bindings. It is designed for public research queries only, requiring Python 3.10+ and HTTPS access. Do not use for clinical guidance or sensitive data.
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Paperclip Biomedical Research CLI
paperclip
K-Dense-AI/scientific-agent-skills
472
Search and read biomedical papers, regulatory documents, clinical trials, and protein databases via the Paperclip CLI, with semantic search, SQL, map/reduce, and line-pinned citations.
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Pathogen Variant Surveillance
pathogen-variant-surveillance
K-Dense-AI/scientific-agent-skills
360
Query live genomic surveillance data via GenSpectrum LAPIS API to identify circulating viral lineages, growth rates, and mutations. Essential for determining current pathogen states like dominant SARS-CoV-2 variants or influenza clades, ensuring accuracy beyond static knowledge cutoffs. Supports multiple pathogens including SARS-CoV-2, Influenza, and RSV.
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Pharmacokinetic and Pharmacodynamic Modeling
pkpd-modeling
K-Dense-AI/scientific-agent-skills
141
This skill performs pharmacokinetic and pharmacodynamic modelling, including non-compartmental analysis, compartmental fitting, and population PK. It helps derive exposure metrics, evaluate dosing regimens, and predict drug interactions using Python scripts. Suitable for analyzing concentration-time data and supporting clinical pharmacology workflows.
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Japanese NLP Resource Comparison
compare
taishi-i/awesome-japanese-nlp-resources
321
Compare multiple Japanese NLP libraries, models, or datasets across user-selected criteria, rendered as a clear table with ratings. Ideal for choosing between alternatives like MeCab vs Sudachi, or evaluating tools for tasks such as morphological analysis, embeddings, or OCR.
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