Skill UI

A comprehensive Python package providing a unified interface to over 40 major bioinformatics web services and databases. Use it for complex biological workflows, including cross-database querying (e.g., UniProt, KEGG, ChEMBL), identifier mapping, protein sequence retrieval, pathway analysis, and running sequence similarity searches like BLAST. It streamlines data integration from multiple life science resources into consistent Python code.

Provides comprehensive tools for academic research, allowing users to search databases like Google Scholar and PubMed. It extracts accurate metadata, validates citations, and generates standard formats like BibTeX. The skill ensures reference accuracy and supports the creation of scientific schematics to enhance document visualization.

gget is a comprehensive command-line tool and Python package offering unified access to over 20 genomic databases. It facilitates quick lookups for gene information, sequence analysis (BLAST), protein structures, and expression data, supporting both interactive CLI use and advanced programmatic Python workflows for biological research.

This skill provides programmatic access to the PrimeKG, a comprehensive knowledge graph integrating over 20 primary databases. It facilitates multiscale biological research by mapping complex relationships between genes, drugs, diseases, and phenotypes. Use it for drug repurposing, identifying novel disease targets, and analyzing molecular mechanisms across various biological scales.

Pymatgen is a comprehensive Python toolkit designed for computational materials science. It enables users to create, analyze, and manipulate complex crystal structures, calculate electronic properties (DOS, band structures), simulate phase transitions, and interact with large material databases like the Materials Project. Ideal for solid-state physics, chemistry, and advanced materials research.

Provides comprehensive guidance on determining the optimal scaling strategy for Qdrant vector databases. Covers when to transition from vertical to horizontal scaling, how to select the right number of nodes and shards, and best practices for setting replication factors to ensure zero-downtime operation and fault tolerance. Also details proper shard management and common scaling pitfalls to avoid.

A comprehensive guide for diagnosing production performance issues in Qdrant vector databases. Learn how to systematically check the optimizer status, analyze high memory usage (OOM crashes), and troubleshoot slow query latencies using key metrics and dedicated API endpoints. Essential for maintaining optimal operational health.

This skill provides a comprehensive workflow for querying documented, authoritative public APIs across scientific, environmental, and medical domains (e.g., NASA, PubChem, USGS). It ensures that data retrieval is reproducible, auditable, and traceable by defining explicit endpoints, handling pagination, and verifying data provenance, rather than relying on general knowledge inference.

Provides comprehensive guidance on upgrading your Qdrant vector database version while ensuring data integrity and maintaining application availability. It covers compatibility rules for major/minor versions, recommends step-by-step migration plans, and details how to perform zero-downtime rolling upgrades using replication factors.

This runbook provides systematic procedures for diagnosing and resolving common automation failures specific to Apple Notes on macOS. It covers critical local issues like app crashes, iCloud sync failures, TCC permission revocations, and database corruption, following a comprehensive detect-diagnose-fix-verify cycle. Essential for maintaining reliable Notes automation workflows.

This tool collects comprehensive diagnostic data from ClickHouse system tables. It gathers crucial metrics, query logs, merge statuses, and disk usage information. It is essential for troubleshooting performance bottlenecks, preparing detailed support tickets, or investigating complex database infrastructure issues.

A comprehensive guide for Amazon Aurora DSQL, a serverless, PostgreSQL-compatible distributed SQL database. This skill covers the entire database lifecycle, including schema management, direct query execution, complex data migrations (e.g., MySQL to DSQL), and advanced performance tuning via query plan analysis (EXPLAIN ANALYZE). Essential for secure, multi-tenant application development.