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Time Series Decomposer

time-series-decomposer

jeremylongshore/claude-code-plugins-plus-skills

Automates time series decomposition work in data analytics by guiding through patterns and best practices, generating production-ready code/configuration, and validating outputs for SQL, visualization, and BI workflows.

Visualization Best Practices Guide

visualization-best-practices

jeremylongshore/claude-code-plugins-plus-skills

Automated help for data analytics visualization best practices, offering step-by-step guidance, industry patterns, production-ready code, and validation for dashboards and reports.

NGS Data Visualization

K-Dense-AI/claude-scientific-skills

deepTools is a Python command-line suite for NGS workflows, converting BAM files into normalized coverage, running QC (fingerprint, correlation, PCA), comparing samples, and rendering heatmaps or profiles for ChIP-seq, RNA-seq, and ATAC-seq analyses.

Phylogenetic Tree Toolkit

K-Dense-AI/claude-scientific-skills

A toolkit for phylogenetic tree manipulation, event detection, NCBI taxonomy integration, and publication-quality visualization, streamlining phylogenomics workflows and gene family analysis.

Scientific Data Exploration

exploratory-data-analysis

K-Dense-AI/claude-scientific-skills

Automates detection and deep exploratory analysis across 200+ scientific data formats, assessing quality, extracting metadata, and recommending visualizations while generating markdown reports that guide downstream workflows and highlight structure and distributions.

Markdown Mermaid Diagram Workflow

markdown-mermaid-writing

K-Dense-AI/claude-scientific-skills

Defines a Markdown/Mermaid-first documentation skill for scientific and technical writing, providing diagram standards, 24 reference types, and templates so every report, README, or analysis stays text-first, versionable, and visualization-ready.

MATLAB Octave Essentials

K-Dense-AI/claude-scientific-skills

Offers MATLAB and GNU Octave guidance for matrix math, data import/export, visualizations, statistics, signal processing, differential equations, and general scripting—helpful when writing or translating MATLAB/Octave code and running scripts under either interpreter.

Matplotlib Visualization Guide

K-Dense-AI/claude-scientific-skills

Guides using matplotlib to craft static, animated, and interactive plots through both pyplot and object-oriented APIs, detailing styling, subplots, and export options for publication-ready scientific workflows.

Neuropixels Analysis Toolkit

neuropixels-analysis

K-Dense-AI/claude-scientific-skills

End-to-end Neuropixels recording analysis covering SpikeGLX/OpenEphys/NWB loading, preprocessing, motion correction, Kilosort4 sorting, quality metrics, Allen/IBL curation, and AI-assisted visualization for extracellular electrophysiology.

Pymoo Multi Objective Optimizer

K-Dense-AI/claude-scientific-skills

Python framework for multi-objective optimization, offering NSGA-II/III, MOEA/D, benchmark suites, customizable operators, and visualization to help engineering teams explore Pareto fronts and make multi-criteria decisions.

QuTiP Quantum Toolbox

K-Dense-AI/claude-scientific-skills

QuTiP is a Python toolbox for simulating open and closed quantum systems, offering solvers for master equations, trajectory methods, visualization, and analysis tailored to quantum research, education, and exploratory physics studies.

Scanpy Single-Cell Workflow

K-Dense-AI/claude-scientific-skills

Scanpy is a scalable Python toolkit for single-cell RNA-seq analyses, covering QC, normalization, dimensionality reduction, clustering, marker discovery, annotation, and publication-ready visualization across h5ad/10X/CSV datasets.

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