Skills Development Manuscript Ethics and Data Compliance Registration

Manuscript Ethics and Data Compliance Registration

v20260724
cc-ethics-registration
This guide assists researchers in compiling and documenting all necessary ethical approvals, biosafety statements, and data/code availability declarations required for high-impact scientific manuscripts (e.g., Cancer Cell). It ensures compliance with guidelines covering animal protocols (IACUC), human subject ethics (IRB/Consent), and data sharing standards (GEO, Zenodo).
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Overview

Ethics, Approvals & Data Availability (cc-ethics-registration)

When to trigger

  • The study uses animals, human samples, or hazardous agents
  • You need the IACUC / IRB / consent / biosafety statements
  • You need the Data and code availability statement and accessions
  • A clinical-translational component may need trial registration

Animal work — IACUC

  • State that all animal procedures were approved by the institutional IACUC (or equivalent), with the protocol number and institution.
  • Confirm compliance with relevant national/institutional guidelines.
  • Pair with ARRIVE-style methods reporting (sample size, randomization, blinding, humane endpoints) handled in cc-reporting-standards.

Human samples — IRB & consent

  • State IRB / ethics committee approval (institution + protocol).
  • State that informed consent was obtained (or a documented waiver and its basis).
  • Affirm compliance with the Declaration of Helsinki for human-subjects research.
  • For patient-identifiable genomic data, note controlled-access deposition (dbGaP/EGA) and any data-use limitations.
  • If a clinical trial provided samples/outcomes, give the registration number (e.g., ClinicalTrials.gov) and registry.

Biosafety & other compliance

  • Note biosafety level / institutional biosafety approval for pathogens, lentivirus/retrovirus, or hazardous reagents where relevant.
  • Recombinant DNA / dual-use considerations if applicable.
  • Disclose any field-collected or regulated materials (permits).

Data and code availability (Cell Press standard)

Provide an explicit statement with three components:

  1. Data — all newly generated datasets deposited and accessions listed (GEO/SRA for sequencing; dbGaP/EGA for controlled human genomics; PRIDE for proteomics; PDB/EMDB for structures; MetaboLights/Workbench for metabolomics). State public availability as of publication date.
  2. Code — any original/custom code deposited in a citable repository with a DOI (e.g., Zenodo release of a GitHub tag).
  3. Other — any additional information/reagents available from the lead contact on request.

Accessions must also appear in the Key Resources Table. "Available on request" is not acceptable for the data types above.

Authorship & disclosure (usually adjacent)

  • Author contributions (CRediT-style), competing-interests declaration, and funding statement are typically required — confirm current sections on the author page.

Checklist

  • IACUC approval stated with protocol # and institution (if animals)
  • IRB/ethics approval + informed consent (or waiver) stated (if human samples)
  • Declaration of Helsinki compliance affirmed (human subjects)
  • Controlled-access deposition noted for patient-identifiable genomics
  • Trial registration number given (if a registered trial supplied data)
  • Biosafety / hazardous-agent approvals noted where relevant
  • Data availability: all accessions listed and in the KRT
  • Code deposited with a citable DOI
  • Competing interests, funding, and author contributions drafted

Anti-patterns

  • "Animal experiments followed guidelines" with no IACUC approval/number
  • Human samples used with no IRB/consent statement
  • Genomic patient data with no controlled-access plan
  • "Data available upon request" for sequencing/proteomics/structures
  • Missing or vague competing-interests / funding declarations
  • Trial-derived data with no registration number

Ethics pass for Cancer Cell

Use this as a second-pass capability check. First lock the cancer context, mechanism, model system, validation chain, and translational boundary; then test whether the manuscript addresses cancer-biology reviewers who expect mechanistic oncology, translational relevance, and strong multi-modal validation.

  • Primary move: Check consent/approval, registration, safety, privacy, data sharing, and disclosure statements before claiming compliance.
  • Decision ledger: return claim / evidence / blocker / next edit rows so the next pass can patch the manuscript directly.
  • Neighbor test: compare against Cell for broader biology, Nature Cancer for oncology breadth, Clinical Cancer Research for clinical translation; if the neighboring outlet has the stronger audience claim, recommend re-routing before polishing.
  • Verification floor: before submission-ready advice, re-open resources/official-source-map.md for volatile rules and name the one unresolved fact that could change the recommendation.

Output format

【Animal】IACUC approval + protocol #? Y/N
【Human】IRB + consent + Helsinki? controlled-access if needed? Y/N
【Biosafety】approvals noted where relevant? Y/N
【Trial registration】number given (if applicable)? Y/N
【Data availability】accessions listed + in KRT? Y/N
【Code】DOI deposited? Y/N
【Disclosures】competing interests / funding / contributions? Y/N
【Next step】cc-writing-style or cc-submission
Info
Category Development
Name cc-ethics-registration
Version v20260724
Size 5.22KB
Updated At 2026-07-28
Language