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OFR Hedge Fund Monitor

hedgefundmonitor

K-Dense-AI/claude-scientific-skills

Access aggregated OFR hedge fund time series and metadata without auth, covering Form PF stats, repo volumes, futures trader positioning, and leverage/counterparty metrics for risk monitoring or research.

Human Metabolome Explorer

K-Dense-AI/claude-scientific-skills

Access HMDB to search over 220K human metabolites by name, ID, structure, disease or specimen, retrieve chemical/clinical/pathway data, and download spectra for metabolomics workflows.

Scientific Hypothesis Formulation

hypothesis-generation

K-Dense-AI/claude-scientific-skills

Guides structured hypothesis generation by combining literature searches, evidence synthesis, competing explanations, and experimental design, with mandatory AI-generated scientific schematics for complete reports.

Systematic Literature Review

literature-review

K-Dense-AI/claude-scientific-skills

Conduct rigorous, multi-database literature reviews with systematic workflows, verified citations in styles like APA or Nature, and AI-enhanced schematics for publication-ready markdown and PDF outputs in biomedical and technical domains.

Metabolomics Workbench API

metabolomics-workbench-database

K-Dense-AI/claude-scientific-skills

Query the NIH Metabolomics Workbench via REST API to fetch metabolites, RefMet nomenclature, mass-spec searches, and detailed study datasets for biomarker discovery and metabolomics research.

Neuropixels Analysis Toolkit

neuropixels-analysis

K-Dense-AI/claude-scientific-skills

End-to-end Neuropixels recording analysis covering SpikeGLX/OpenEphys/NWB loading, preprocessing, motion correction, Kilosort4 sorting, quality metrics, Allen/IBL curation, and AI-assisted visualization for extracellular electrophysiology.

Open Targets Explorer API

opentargets-database

K-Dense-AI/claude-scientific-skills

Provides GraphQL queries to the Open Targets Platform for target-disease associations, tractability, safety, drugs, and multi-omics evidence to guide therapeutic target identification, safety assessment, and repurposing research workflows.

Scientific Peer Review Checklist

K-Dense-AI/claude-scientific-skills

Structured manuscript and grant review guidance that walks reviewers through methodology, statistics, reporting compliance, and constructive feedback for rigorous scientific evaluation across disciplines.

PyDESeq2 Differential Analysis

K-Dense-AI/claude-scientific-skills

PyDESeq2 brings the DESeq2 differential expression workflow to Python, letting users load bulk RNA-seq counts, specify design formulas, fit DESeq2 models, run Wald tests with FDR correction, optionally apply apeGLM shrinkage, and export gene-level statistics within pandas/AnnData pipelines.

PyMC Bayesian Modeling

pymc-bayesian-modeling

K-Dense-AI/claude-scientific-skills

Structured workflow for building hierarchical Bayesian models with PyMC 5+, covering data prep, NUTS sampling, diagnostics, posterior checks, and predictive inference.

QuTiP Quantum Toolbox

K-Dense-AI/claude-scientific-skills

QuTiP is a Python toolbox for simulating open and closed quantum systems, offering solvers for master equations, trajectory methods, visualization, and analysis tailored to quantum research, education, and exploratory physics studies.

Advanced Molecular Control

K-Dense-AI/claude-scientific-skills

RDKit delivers a Python-based cheminformatics toolkit for parsing SMILES/SDF, computing descriptors, generating 2D/3D coordinates, fingerprinting, searching substructures, managing reactions, and visualizing molecules, ideal for drug discovery and computational chemistry workflows.

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