Skill UI

Retrieve AlphaFold’s AI-predicted protein models via UniProt IDs, download CIF/PDB coordinates, inspect confidence metrics, and feed them into structural analysis or drug-discovery pipelines.

LatchBio Integration provides a Python-first platform to compose, deploy, and monitor serverless bioinformatics pipelines with the Latch SDK, decorator-based tasks, cloud storage (LatchFile/Dir), GPU tuning, and Nextflow or Snakemake interoperability.

gget is a comprehensive command-line and Python package providing unified access to over 20 major bioinformatics databases. Users can perform deep analyses across genomics, proteomics, and disease associations. Key functions include gene information lookups, sequence alignment (BLAST), structural prediction (AlphaFold), single-cell analysis, and enrichment studies, supporting both interactive queries and automated pipelines.

Tamarind Bio is a comprehensive cloud platform providing access to state-of-the-art open-source tools for structural biology and molecular design. It supports complex tasks including protein structure prediction (AlphaFold, ESMFold), molecular design (RFdiffusion, ProteinMPNN), protein-ligand docking, and binding affinity prediction. Users submit sequences or structures and receive predicted results without requiring local GPU hardware.