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Protein-Ligand
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DiffDock Pose Predictor
diffdock
K-Dense-AI/claude-scientific-skills
81
DiffDock uses diffusion-based deep learning to predict protein-ligand binding poses, confidence, and batch virtual screening workflows for structure-based drug design.
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DiffDock Protein-Ligand Docking
diffdock
K-Dense-AI/scientific-agent-skills
242
Predicts protein-small-molecule binding poses with DiffDock and DiffDock-L using PDB or sequence plus SMILES/SDF/MOL2, supporting batch docking, pose triage, and confidence interpretation.
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Rowan Molecular Modeling Workflow Platform
rowan
K-Dense-AI/scientific-agent-skills
271
Rowan is a cloud-native molecular modeling and medicinal-chemistry workflow platform with a Python API. It enables pKa prediction, molecular docking, conformer search, and protein-ligand cofolding without local HPC infrastructure. Ideal for batch screening and multi-step chemistry pipelines in drug discovery.
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