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Bulk RNA-seq Analysis Pipeline
bulk-rnaseq
K-Dense-AI/scientific-agent-skills
211
An end-to-end orchestrator for bulk RNA-seq analysis, guiding users from raw FASTQ reads through QC, alignment, quantification, and differential expression. It supports both nf-core/rnaseq and standalone tools like STAR/Salmon, ensuring reproducible and statistically sound results for gene-level counts and pathway enrichment.
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